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Genomic insights into the population history and adaptive traits of Latin American Criollo cattle.

Criollo cattle, the descendants of animals brought by Iberian colonists to the Americas, have been the subject of natural and human-mediated selection in novel tropical agroecological zones for centuries. Consequently, these breeds have evolved …

Verifying origin claims on dairy products using stable isotope ratio analysis and random forest classification.

Scientifically underpinning geographic origin claims will improve consumer trust in food labels. Stable isotope ratio analysis (SIRA) is an analytical technique that supports origin verification of food products based on naturally occurring …

New paper on A simulation study for multifactorial genetic disorders to quantify the impact of polygenic risk scores on critical illness insurance.

With advances in genetic research, the understanding of the genetic structure of disease and the ability to predict disease risk have been enhanced. Polygenic risk scores (PRS) have been developed to assess a person’s risk of developing any heritable …

Genome-wide local ancestry and evidence for mitonuclear coadaptation in African hybrid cattle populations (Bos taurus/indicus)

The phenotypic diversity of African cattle reflects adaptation to a wide range of agroecological conditions, human-mediated selection preferences, and complex patterns of admixture between the humpless Bos taurus (taurine) and humped Bos indicus …

Static and dynamic methods in social network analysis reveal the association patterns of desert-dwelling giraffe

Patterns of association in animal societies vary through space and time. Understanding such variation is key to predicting inter- and intra-population variation across factors as diverse as gene flow, disease transmission, and resilience to climate …

Computational modelling of Chromosomally Clustering Protein Domains In Bacteria

Background: In bacteria, genes with related functions - such as those involved in the metabolism of the same compound or in infection processes - are often physically close on the genome and form groups called clusters. The enrichment of such …

Fine-scale Inference of Ancestry Segments without Prior Knowledge of Admixing Groups

We present an algorithm for inferring ancestry segments and characterizing admixture events, which involve an arbitrary number of genetically differentiated groups coming together. This allows inference of the demographic history of the species, …

Statistical challenges in estimating past climate changes

Latent Space Models for Multiview Network Data

Social relationships consist of interactions along multiple dimensions. In social networks, this means that individuals form multiple types of relationships with the same person (e.g., an individual will not trust all of his/her acquaintances). …

Online Trans-dimensional von Mises-Fisher Mixture Models for User Profiles

The proliferation of online communities has attracted much attention to modelling user behaviour in terms of social interaction, language adoption and contribution activity. Nevertheless, when applied to large-scale and cross-platform behavioural …